Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.99■□□□□ 0.79
Hoxc9P09633 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.99■□□□□ 0.79
Hoxc9P09633 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxc9P09633 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxc9P09633 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxc9P09633 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxc9P09633 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxc9P09633 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxc9P09633 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxc9P09633 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxc9P09633 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxc9P09633 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxc9P09633 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hoxc9P09633 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxc9P09633 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.98■□□□□ 0.79
Hoxc9P09633 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.98■□□□□ 0.79
Hoxc9P09633 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxc9P09633 Gm27430-201ENSMUST00000184585 107 ntBASIC19.98■□□□□ 0.79
Hoxc9P09633 Gm44333-201ENSMUST00000197168 107 ntBASIC19.98■□□□□ 0.79
Hoxc9P09633 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.98■□□□□ 0.79
Hoxc9P09633 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Hoxc9P09633 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxc9P09633 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxc9P09633 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxc9P09633 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Hoxc9P09633 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxc9P09633 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Gm2810-201ENSMUST00000118681 990 ntBASIC19.97■□□□□ 0.79
Hoxc9P09633 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.97■□□□□ 0.79
Hoxc9P09633 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.97■□□□□ 0.79
Hoxc9P09633 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.97■□□□□ 0.79
Hoxc9P09633 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxc9P09633 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.96■□□□□ 0.79
Hoxc9P09633 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.96■□□□□ 0.79
Hoxc9P09633 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.96■□□□□ 0.79
Hoxc9P09633 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Hoxc9P09633 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.96■□□□□ 0.79
Hoxc9P09633 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Gm15693-201ENSMUST00000120470 637 ntBASIC19.96■□□□□ 0.79
Hoxc9P09633 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.96■□□□□ 0.79
Hoxc9P09633 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
Hoxc9P09633 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hoxc9P09633 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.96■□□□□ 0.79
Hoxc9P09633 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc9P09633 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.79
Hoxc9P09633 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Hoxc9P09633 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Hoxc9P09633 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hoxc9P09633 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.95■□□□□ 0.78
Hoxc9P09633 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hoxc9P09633 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hoxc9P09633 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc9P09633 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hoxc9P09633 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Hoxc9P09633 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.94■□□□□ 0.78
Hoxc9P09633 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc9P09633 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms