Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NeflP08551 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.18■□□□□ 0.82
NeflP08551 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NeflP08551 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NeflP08551 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
NeflP08551 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NeflP08551 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.17■□□□□ 0.82
NeflP08551 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.17■□□□□ 0.82
NeflP08551 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NeflP08551 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NeflP08551 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC20.16■□□□□ 0.82
NeflP08551 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.16■□□□□ 0.82
NeflP08551 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.16■□□□□ 0.82
NeflP08551 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Gm21559-201ENSMUST00000220638 855 ntBASIC20.16■□□□□ 0.82
NeflP08551 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
NeflP08551 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Gm8587-201ENSMUST00000076538 843 ntBASIC20.16■□□□□ 0.82
NeflP08551 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
NeflP08551 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NeflP08551 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NeflP08551 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC20.15■□□□□ 0.82
NeflP08551 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
NeflP08551 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC20.15■□□□□ 0.82
NeflP08551 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
NeflP08551 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.15■□□□□ 0.82
NeflP08551 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.15■□□□□ 0.82
NeflP08551 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.15■□□□□ 0.82
NeflP08551 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NeflP08551 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NeflP08551 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NeflP08551 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NeflP08551 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
NeflP08551 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
NeflP08551 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NeflP08551 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NeflP08551 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
NeflP08551 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NeflP08551 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NeflP08551 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NeflP08551 Gm11355-201ENSMUST00000121120 306 ntBASIC20.14■□□□□ 0.81
NeflP08551 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
NeflP08551 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.14■□□□□ 0.81
NeflP08551 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.14■□□□□ 0.81
NeflP08551 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.14■□□□□ 0.81
NeflP08551 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NeflP08551 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
NeflP08551 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NeflP08551 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms