Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
P06320 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC9.83□□□□□ -0.84
P06320 Slc35b2-202ENSMUST00000223987 1766 ntBASIC9.83□□□□□ -0.84
P06320 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
P06320 AC174678.1-201ENSMUST00000228007 2749 ntBASIC9.83□□□□□ -0.84
P06320 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC9.82□□□□□ -0.84
P06320 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
P06320 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
P06320 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC9.82□□□□□ -0.84
P06320 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
P06320 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Gm38027-201ENSMUST00000192315 235 ntBASIC9.82□□□□□ -0.84
P06320 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC9.82□□□□□ -0.84
P06320 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
P06320 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
P06320 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 AC154855.1-201ENSMUST00000227353 1458 ntBASIC9.82□□□□□ -0.84
P06320 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
P06320 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC9.82□□□□□ -0.84
P06320 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
P06320 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC9.82□□□□□ -0.84
P06320 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Tfap2a-203ENSMUST00000223869 2037 ntBASIC9.82□□□□□ -0.84
P06320 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
P06320 Nrn1-203ENSMUST00000223611 1443 ntBASIC9.82□□□□□ -0.84
P06320 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P06320 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
P06320 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
P06320 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
P06320 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC9.81□□□□□ -0.84
P06320 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC9.81□□□□□ -0.84
P06320 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Gm38327-201ENSMUST00000195852 1755 ntBASIC9.81□□□□□ -0.84
P06320 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
P06320 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC9.81□□□□□ -0.84
P06320 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC9.81□□□□□ -0.84
P06320 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC9.81□□□□□ -0.84
P06320 Gm18284-201ENSMUST00000172604 624 ntBASIC9.81□□□□□ -0.84
P06320 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC9.81□□□□□ -0.84
P06320 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P06320 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
P06320 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms