Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Syn1O88935 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Syn1O88935 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.89■□□□□ 0.13
Syn1O88935 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.89■□□□□ 0.13
Syn1O88935 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Syn1O88935 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.89■□□□□ 0.13
Syn1O88935 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.89■□□□□ 0.13
Syn1O88935 Gm8410-201ENSMUST00000117225 605 ntBASIC15.89■□□□□ 0.13
Syn1O88935 Gm16198-201ENSMUST00000118766 670 ntBASIC15.89■□□□□ 0.13
Syn1O88935 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.89■□□□□ 0.13
Syn1O88935 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Syn1O88935 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.89■□□□□ 0.13
Syn1O88935 Gm6888-201ENSMUST00000221983 706 ntBASIC15.89■□□□□ 0.13
Syn1O88935 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.89■□□□□ 0.13
Syn1O88935 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.89■□□□□ 0.13
Syn1O88935 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Syn1O88935 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Syn1O88935 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Syn1O88935 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Syn1O88935 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Syn1O88935 Gm12008-201ENSMUST00000117791 755 ntBASIC15.88■□□□□ 0.13
Syn1O88935 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.88■□□□□ 0.13
Syn1O88935 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Syn1O88935 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.88■□□□□ 0.13
Syn1O88935 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.88■□□□□ 0.13
Syn1O88935 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Syn1O88935 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Syn1O88935 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Syn1O88935 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Syn1O88935 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.87■□□□□ 0.13
Syn1O88935 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.87■□□□□ 0.13
Syn1O88935 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Syn1O88935 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.87■□□□□ 0.13
Syn1O88935 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Syn1O88935 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Syn1O88935 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.86■□□□□ 0.13
Syn1O88935 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Syn1O88935 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.86■□□□□ 0.13
Syn1O88935 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms