Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.27□□□□□ -0.29
Cldn1O88551 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cldn1O88551 Gm37153-201ENSMUST00000193637 231 ntBASIC13.27□□□□□ -0.29
Cldn1O88551 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.27□□□□□ -0.29
Cldn1O88551 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cldn1O88551 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.27□□□□□ -0.29
Cldn1O88551 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.27□□□□□ -0.29
Cldn1O88551 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.27□□□□□ -0.29
Cldn1O88551 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cldn1O88551 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.27□□□□□ -0.29
Cldn1O88551 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.27□□□□□ -0.29
Cldn1O88551 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Cldn1O88551 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cldn1O88551 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.26□□□□□ -0.29
Cldn1O88551 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.26□□□□□ -0.29
Cldn1O88551 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cldn1O88551 Gm36967-201ENSMUST00000193814 266 ntBASIC13.26□□□□□ -0.29
Cldn1O88551 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cldn1O88551 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldn1O88551 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.25□□□□□ -0.29
Cldn1O88551 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.25□□□□□ -0.29
Cldn1O88551 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cldn1O88551 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cldn1O88551 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.25□□□□□ -0.29
Cldn1O88551 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Cldn1O88551 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.25□□□□□ -0.29
Cldn1O88551 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.25□□□□□ -0.29
Cldn1O88551 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.25□□□□□ -0.29
Cldn1O88551 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldn1O88551 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Cldn1O88551 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cldn1O88551 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.24□□□□□ -0.29
Cldn1O88551 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldn1O88551 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms