Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cops4O88544 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Gm11336-201ENSMUST00000118168 334 ntBASIC14.34□□□□□ -0.11
Cops4O88544 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cops4O88544 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.34□□□□□ -0.11
Cops4O88544 Gm18959-201ENSMUST00000208954 655 ntBASIC14.34□□□□□ -0.11
Cops4O88544 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.34□□□□□ -0.11
Cops4O88544 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.34□□□□□ -0.11
Cops4O88544 Gm10566-201ENSMUST00000086739 996 ntBASIC14.34□□□□□ -0.11
Cops4O88544 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cops4O88544 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Cops4O88544 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cops4O88544 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops4O88544 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cops4O88544 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cops4O88544 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cops4O88544 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cops4O88544 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cops4O88544 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops4O88544 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops4O88544 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.33□□□□□ -0.12
Cops4O88544 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops4O88544 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops4O88544 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.33□□□□□ -0.12
Cops4O88544 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.33□□□□□ -0.12
Cops4O88544 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cops4O88544 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops4O88544 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
Cops4O88544 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops4O88544 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops4O88544 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops4O88544 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops4O88544 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.33□□□□□ -0.12
Cops4O88544 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.33□□□□□ -0.12
Cops4O88544 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cops4O88544 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.32□□□□□ -0.12
Cops4O88544 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cops4O88544 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Gm26039-201ENSMUST00000158152 144 ntBASIC14.32□□□□□ -0.12
Cops4O88544 Mir1668-201ENSMUST00000184114 107 ntBASIC14.32□□□□□ -0.12
Cops4O88544 Gm29707-201ENSMUST00000196325 491 ntBASIC14.32□□□□□ -0.12
Cops4O88544 Gm43799-201ENSMUST00000201845 579 ntBASIC14.32□□□□□ -0.12
Cops4O88544 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.32□□□□□ -0.12
Cops4O88544 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.32□□□□□ -0.12
Cops4O88544 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cops4O88544 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.32□□□□□ -0.12
Cops4O88544 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cops4O88544 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops4O88544 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cops4O88544 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.31□□□□□ -0.12
Cops4O88544 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cops4O88544 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cops4O88544 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Cops4O88544 Gm45058-201ENSMUST00000205810 766 ntBASIC14.31□□□□□ -0.12
Cops4O88544 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.31□□□□□ -0.12
Cops4O88544 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cops4O88544 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cops4O88544 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops4O88544 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms