Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Cacna1bO55017 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.93□□□□□ -0.02
Cacna1bO55017 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cacna1bO55017 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.93□□□□□ -0.02
Cacna1bO55017 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.93□□□□□ -0.02
Cacna1bO55017 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Cacna1bO55017 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cacna1bO55017 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1bO55017 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1bO55017 Gm15693-201ENSMUST00000120470 637 ntBASIC14.92□□□□□ -0.02
Cacna1bO55017 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cacna1bO55017 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.92□□□□□ -0.02
Cacna1bO55017 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacna1bO55017 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1bO55017 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1bO55017 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1bO55017 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1bO55017 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1bO55017 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1bO55017 Gm6973-201ENSMUST00000117080 721 ntBASIC14.92□□□□□ -0.02
Cacna1bO55017 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.92□□□□□ -0.02
Cacna1bO55017 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacna1bO55017 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cacna1bO55017 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.92□□□□□ -0.02
Cacna1bO55017 Gm2272-201ENSMUST00000194903 582 ntBASIC14.92□□□□□ -0.02
Cacna1bO55017 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Cacna1bO55017 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1bO55017 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.91□□□□□ -0.02
Cacna1bO55017 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.91□□□□□ -0.02
Cacna1bO55017 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.91□□□□□ -0.02
Cacna1bO55017 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cacna1bO55017 Gm29541-201ENSMUST00000191351 678 ntBASIC14.91□□□□□ -0.02
Cacna1bO55017 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.91□□□□□ -0.02
Cacna1bO55017 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.91□□□□□ -0.02
Cacna1bO55017 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.91□□□□□ -0.02
Cacna1bO55017 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cacna1bO55017 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cacna1bO55017 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.91□□□□□ -0.02
Cacna1bO55017 Gm14719-201ENSMUST00000121891 340 ntBASIC14.91□□□□□ -0.02
Cacna1bO55017 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.91□□□□□ -0.02
Cacna1bO55017 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1bO55017 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cacna1bO55017 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1bO55017 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Cacna1bO55017 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1bO55017 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1bO55017 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cacna1bO55017 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1bO55017 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.9□□□□□ -0.02
Cacna1bO55017 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1bO55017 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.9□□□□□ -0.02
Cacna1bO55017 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Cacna1bO55017 Gm25857-201ENSMUST00000082788 129 ntBASIC14.9□□□□□ -0.02
Cacna1bO55017 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.9□□□□□ -0.02
Cacna1bO55017 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cacna1bO55017 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1bO55017 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.9□□□□□ -0.02
Cacna1bO55017 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1bO55017 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1bO55017 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1bO55017 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.9□□□□□ -0.02
Cacna1bO55017 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1bO55017 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Gm38294-201ENSMUST00000192831 381 ntBASIC14.89□□□□□ -0.03
Cacna1bO55017 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.89□□□□□ -0.03
Cacna1bO55017 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.89□□□□□ -0.03
Cacna1bO55017 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1bO55017 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1bO55017 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms