Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccr6O54689 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccr6O54689 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccr6O54689 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccr6O54689 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccr6O54689 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccr6O54689 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccr6O54689 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccr6O54689 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccr6O54689 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccr6O54689 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccr6O54689 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccr6O54689 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccr6O54689 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccr6O54689 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccr6O54689 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccr6O54689 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.02□□□□□ -0.32
Ccr6O54689 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccr6O54689 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.02□□□□□ -0.32
Ccr6O54689 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Gm5643-201ENSMUST00000117081 966 ntBASIC13.02□□□□□ -0.33
Ccr6O54689 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccr6O54689 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccr6O54689 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Ccr6O54689 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccr6O54689 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccr6O54689 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ccr6O54689 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccr6O54689 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.02□□□□□ -0.33
Ccr6O54689 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccr6O54689 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Ccr6O54689 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.02□□□□□ -0.33
Ccr6O54689 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccr6O54689 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ccr6O54689 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccr6O54689 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccr6O54689 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ccr6O54689 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccr6O54689 Gm23547-201ENSMUST00000158210 271 ntBASIC13.01□□□□□ -0.33
Ccr6O54689 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccr6O54689 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ccr6O54689 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccr6O54689 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccr6O54689 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccr6O54689 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccr6O54689 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccr6O54689 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccr6O54689 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13□□□□□ -0.33
Ccr6O54689 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13□□□□□ -0.33
Ccr6O54689 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13□□□□□ -0.33
Ccr6O54689 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms