Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb9E9Q5G2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Gm15467-201ENSMUST00000120582 445 ntBASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Gm13597-201ENSMUST00000121239 375 ntBASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Gm10499-201ENSMUST00000174094 934 ntBASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb9E9Q5G2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Gm5264-201ENSMUST00000190584 848 ntBASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb9E9Q5G2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Gm8000-201ENSMUST00000188378 592 ntBASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb9E9Q5G2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Gm18246-201ENSMUST00000221023 728 ntBASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb9E9Q5G2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms