Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gcn1E9PVA8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gcn1E9PVA8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gcn1E9PVA8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gcn1E9PVA8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gcn1E9PVA8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gcn1E9PVA8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.98□□□□□ -0.33
Gcn1E9PVA8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Gm37259-201ENSMUST00000193903 849 ntBASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Gm6013-201ENSMUST00000212264 699 ntBASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Gm15483-201ENSMUST00000120338 456 ntBASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gcn1E9PVA8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms