Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm5640A3KG49 Gm27463-201ENSMUST00000183569 57 ntBASIC15.75■□□□□ 0.11
Gm5640A3KG49 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm5640A3KG49 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm5640A3KG49 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.75■□□□□ 0.11
Gm5640A3KG49 Odf3b-204ENSMUST00000227834 930 ntBASIC15.75■□□□□ 0.11
Gm5640A3KG49 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm5640A3KG49 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm5640A3KG49 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm5640A3KG49 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.75■□□□□ 0.11
Gm5640A3KG49 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Gm5640A3KG49 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm5640A3KG49 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm5640A3KG49 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Mir1199-201ENSMUST00000117015 119 ntBASIC15.74■□□□□ 0.11
Gm5640A3KG49 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Gm27011-201ENSMUST00000182352 972 ntBASIC15.74■□□□□ 0.11
Gm5640A3KG49 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.74■□□□□ 0.11
Gm5640A3KG49 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.74■□□□□ 0.11
Gm5640A3KG49 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm5640A3KG49 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.73■□□□□ 0.11
Gm5640A3KG49 Gm8520-201ENSMUST00000186517 868 ntBASIC15.73■□□□□ 0.11
Gm5640A3KG49 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5640A3KG49 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.73■□□□□ 0.11
Gm5640A3KG49 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Gm5640A3KG49 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Gm6257-201ENSMUST00000163864 910 ntBASIC15.72■□□□□ 0.11
Gm5640A3KG49 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.72■□□□□ 0.11
Gm5640A3KG49 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.72■□□□□ 0.11
Gm5640A3KG49 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.72■□□□□ 0.11
Gm5640A3KG49 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.72■□□□□ 0.11
Gm5640A3KG49 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.71■□□□□ 0.11
Gm5640A3KG49 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5640A3KG49 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Gm5640A3KG49 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.7■□□□□ 0.1
Gm5640A3KG49 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5640A3KG49 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5640A3KG49 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5640A3KG49 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Gm5640A3KG49 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5640A3KG49 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5640A3KG49 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5640A3KG49 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms