Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC8.06□□□□□ -1.12
Ubr4A2AN08 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC8.06□□□□□ -1.12
Ubr4A2AN08 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 AC154527.2-201ENSMUST00000225256 1466 ntBASIC8.06□□□□□ -1.12
Ubr4A2AN08 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Gm19640-201ENSMUST00000214849 464 ntBASIC8.06□□□□□ -1.12
Ubr4A2AN08 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Mir433-201ENSMUST00000093564 124 ntBASIC8.06□□□□□ -1.12
Ubr4A2AN08 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Mir692-1-201ENSMUST00000102263 109 ntBASIC8.05□□□□□ -1.12
Ubr4A2AN08 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ubr4A2AN08 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Gm43808-201ENSMUST00000202534 2065 ntBASIC8.05□□□□□ -1.12
Ubr4A2AN08 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Gm25951-201ENSMUST00000175330 64 ntBASIC8.05□□□□□ -1.12
Ubr4A2AN08 Gm38230-201ENSMUST00000193572 1159 ntBASIC8.05□□□□□ -1.12
Ubr4A2AN08 Abhd11os-203ENSMUST00000222613 363 ntBASIC8.05□□□□□ -1.12
Ubr4A2AN08 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ubr4A2AN08 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ubr4A2AN08 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Ighv8-7-201ENSMUST00000194349 297 ntBASIC8.04□□□□□ -1.12
Ubr4A2AN08 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Gm8959-201ENSMUST00000213150 571 ntBASIC8.04□□□□□ -1.12
Ubr4A2AN08 AC130669.1-201ENSMUST00000228537 1672 ntBASIC8.04□□□□□ -1.12
Ubr4A2AN08 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC8.04□□□□□ -1.12
Ubr4A2AN08 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Klk2-ps-201ENSMUST00000205342 571 ntBASIC8.04□□□□□ -1.12
Ubr4A2AN08 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Gm7558-201ENSMUST00000193221 1165 ntBASIC8.04□□□□□ -1.12
Ubr4A2AN08 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 AC099645.1-201ENSMUST00000226476 1105 ntBASIC8.04□□□□□ -1.12
Ubr4A2AN08 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 CT030182.1-201ENSMUST00000225935 533 ntBASIC8.04□□□□□ -1.12
Ubr4A2AN08 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ubr4A2AN08 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms