Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd7A2AJK6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd7A2AJK6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd7A2AJK6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd7A2AJK6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd7A2AJK6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd7A2AJK6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd7A2AJK6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd7A2AJK6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd7A2AJK6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chd7A2AJK6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.03■□□□□ -0
Chd7A2AJK6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.03■□□□□ -0
Chd7A2AJK6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
Chd7A2AJK6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.03■□□□□ -0
Chd7A2AJK6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chd7A2AJK6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.03■□□□□ -0
Chd7A2AJK6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.03■□□□□ -0
Chd7A2AJK6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.03■□□□□ -0
Chd7A2AJK6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.03■□□□□ -0
Chd7A2AJK6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.03■□□□□ -0
Chd7A2AJK6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.03■□□□□ -0
Chd7A2AJK6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.03■□□□□ -0
Chd7A2AJK6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd7A2AJK6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd7A2AJK6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chd7A2AJK6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd7A2AJK6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chd7A2AJK6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd7A2AJK6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chd7A2AJK6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd7A2AJK6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.02□□□□□ -0.01
Chd7A2AJK6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Chd7A2AJK6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.01□□□□□ -0.01
Chd7A2AJK6 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.01□□□□□ -0.01
Chd7A2AJK6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Chd7A2AJK6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Chd7A2AJK6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.01□□□□□ -0.01
Chd7A2AJK6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd7A2AJK6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15□□□□□ -0.01
Chd7A2AJK6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15□□□□□ -0.01
Chd7A2AJK6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15□□□□□ -0.01
Chd7A2AJK6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15□□□□□ -0.01
Chd7A2AJK6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15□□□□□ -0.01
Chd7A2AJK6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chd7A2AJK6 Gm16401-202ENSMUST00000197463 2074 ntBASIC15□□□□□ -0.01
Chd7A2AJK6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chd7A2AJK6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chd7A2AJK6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15□□□□□ -0.01
Chd7A2AJK6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Chd7A2AJK6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chd7A2AJK6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chd7A2AJK6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chd7A2AJK6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15□□□□□ -0.01
Chd7A2AJK6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd7A2AJK6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms