Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Rprl3-201ENSMUST00000157400 290 ntBASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Mir3081-201ENSMUST00000175305 84 ntBASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc112A0AUP1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Gm6659-201ENSMUST00000174752 547 ntBASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc112A0AUP1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.71■□□□□ 0.42
Ccdc112A0AUP1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 AA414768-201ENSMUST00000121924 1257 ntBASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Olfr129-201ENSMUST00000122318 993 ntBASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Gm44454-201ENSMUST00000198541 138 ntBASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Gm9172-201ENSMUST00000212092 954 ntBASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.7■□□□□ 0.42
Ccdc112A0AUP1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms