Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm23547-201ENSMUST00000158210 271 ntBASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.11□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Gm7367-201ENSMUST00000057611 492 ntBASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.08□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv13-3A0A0B4J1H2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Mir6404-201ENSMUST00000183699 94 ntBASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-3A0A0B4J1H2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms