Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm11452-201ENSMUST00000122376 690 ntBASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbc1A0A0A6YWV4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbc1A0A0A6YWV4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm18195-201ENSMUST00000207604 706 ntBASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm18622-201ENSMUST00000219361 595 ntBASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbc1A0A0A6YWV4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbc1A0A0A6YWV4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 199 ms