Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Asic1-205ENSMUST00000228185 1818 ntBASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm13312-201ENSMUST00000119631 718 ntBASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms