Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Gm6257-201ENSMUST00000163864 910 ntBASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-1A0A075B699 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Gm17808-201ENSMUST00000200859 894 ntBASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-1A0A075B699 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Grk6-207ENSMUST00000225925 2769 ntBASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-1A0A075B699 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trav9d-1A0A075B699 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms