Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Gm13158-201ENSMUST00000122007 736 ntBASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav8-1A0A075B641 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav8-1A0A075B641 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Gm12896-201ENSMUST00000118430 226 ntBASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Gm12933-201ENSMUST00000120203 872 ntBASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Gm24841-201ENSMUST00000158676 357 ntBASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Gm27405-201ENSMUST00000184201 112 ntBASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav8-1A0A075B641 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Gm12382-201ENSMUST00000122005 922 ntBASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Gm17661-201ENSMUST00000170317 270 ntBASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Gm18025-201ENSMUST00000221733 862 ntBASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav8-1A0A075B641 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms