Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
ClcnkaQ9WUB7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm8825-201ENSMUST00000182565 998 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm4518-201ENSMUST00000182638 718 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClcnkaQ9WUB7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClcnkaQ9WUB7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClcnkaQ9WUB7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms