Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OtofQ9ESF1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OtofQ9ESF1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OtofQ9ESF1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OtofQ9ESF1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.31■□□□□ 0.04
OtofQ9ESF1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OtofQ9ESF1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
OtofQ9ESF1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OtofQ9ESF1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtofQ9ESF1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.29■□□□□ 0.04
OtofQ9ESF1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtofQ9ESF1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Gm8396-201ENSMUST00000057361 823 ntBASIC15.29■□□□□ 0.04
OtofQ9ESF1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtofQ9ESF1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.28■□□□□ 0.04
OtofQ9ESF1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
OtofQ9ESF1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
OtofQ9ESF1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtofQ9ESF1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.27■□□□□ 0.04
OtofQ9ESF1 Gm25948-201ENSMUST00000175334 112 ntBASIC15.27■□□□□ 0.04
OtofQ9ESF1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtofQ9ESF1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtofQ9ESF1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtofQ9ESF1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtofQ9ESF1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtofQ9ESF1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtofQ9ESF1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Gm2272-201ENSMUST00000194903 582 ntBASIC15.27■□□□□ 0.03
OtofQ9ESF1 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.27■□□□□ 0.03
OtofQ9ESF1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.27■□□□□ 0.03
OtofQ9ESF1 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.27■□□□□ 0.03
OtofQ9ESF1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
OtofQ9ESF1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OtofQ9ESF1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
OtofQ9ESF1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
OtofQ9ESF1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OtofQ9ESF1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OtofQ9ESF1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms