Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Mir8098-201ENSMUST00000184011 137 ntBASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps35Q9EQH3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Gm28659-201ENSMUST00000188013 759 ntBASIC15.54■□□□□ 0.08
Vps35Q9EQH3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps35Q9EQH3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Gm4535-201ENSMUST00000182274 558 ntBASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Gm18622-201ENSMUST00000219361 595 ntBASIC15.53■□□□□ 0.08
Vps35Q9EQH3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Gm6296-201ENSMUST00000222599 943 ntBASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Gm10355-201ENSMUST00000097146 517 ntBASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps35Q9EQH3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps35Q9EQH3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms