Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Gm9103-201ENSMUST00000119371 405 ntBASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb1Q91Y08 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb1Q91Y08 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Gm15358-201ENSMUST00000119249 520 ntBASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb1Q91Y08 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb1Q91Y08 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 BC037039-201ENSMUST00000192003 2205 ntBASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms