Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb4Q91XZ6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Gm13312-201ENSMUST00000119631 718 ntBASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb4Q91XZ6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Olfr129-201ENSMUST00000122318 993 ntBASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Gm6257-201ENSMUST00000163864 910 ntBASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhb4Q91XZ6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms