Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm7977-201ENSMUST00000193787 748 ntBASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb8Q91XZ2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb8Q91XZ2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Gm15372-201ENSMUST00000120729 834 ntBASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb8Q91XZ2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Gm7367-201ENSMUST00000057611 492 ntBASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb8Q91XZ2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms