Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.48■□□□□ 0.23
TraipQ8VIG6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.48■□□□□ 0.23
TraipQ8VIG6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Thap2-203ENSMUST00000218989 527 ntBASIC16.48■□□□□ 0.23
TraipQ8VIG6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.48■□□□□ 0.23
TraipQ8VIG6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TraipQ8VIG6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TraipQ8VIG6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.47■□□□□ 0.23
TraipQ8VIG6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.47■□□□□ 0.23
TraipQ8VIG6 Mir1895-201ENSMUST00000122615 79 ntBASIC16.47■□□□□ 0.23
TraipQ8VIG6 Gm11025-201ENSMUST00000140773 466 ntBASIC16.47■□□□□ 0.23
TraipQ8VIG6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TraipQ8VIG6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Gm26308-201ENSMUST00000157768 69 ntBASIC16.46■□□□□ 0.23
TraipQ8VIG6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TraipQ8VIG6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TraipQ8VIG6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TraipQ8VIG6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.45■□□□□ 0.22
TraipQ8VIG6 Gm27494-201ENSMUST00000184735 189 ntBASIC16.45■□□□□ 0.22
TraipQ8VIG6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TraipQ8VIG6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.44■□□□□ 0.22
TraipQ8VIG6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms