Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Gm9103-201ENSMUST00000119371 405 ntBASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HnrnpuQ8VEK3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HnrnpuQ8VEK3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HnrnpuQ8VEK3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HnrnpuQ8VEK3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms