Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.55■□□□□ 0.08
Nudcd3Q8R1N4 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.55■□□□□ 0.08
Nudcd3Q8R1N4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nudcd3Q8R1N4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nudcd3Q8R1N4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nudcd3Q8R1N4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nudcd3Q8R1N4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nudcd3Q8R1N4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nudcd3Q8R1N4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Gm22240-201ENSMUST00000175225 82 ntBASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Mir6404-201ENSMUST00000183699 94 ntBASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Gm37722-201ENSMUST00000193757 208 ntBASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nudcd3Q8R1N4 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Nudcd3Q8R1N4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nudcd3Q8R1N4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Nudcd3Q8R1N4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nudcd3Q8R1N4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Nudcd3Q8R1N4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nudcd3Q8R1N4 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.52■□□□□ 0.07
Nudcd3Q8R1N4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nudcd3Q8R1N4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nudcd3Q8R1N4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nudcd3Q8R1N4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nudcd3Q8R1N4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nudcd3Q8R1N4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms