Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam228aQ8CDW1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fam228aQ8CDW1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam228aQ8CDW1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam228aQ8CDW1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam228aQ8CDW1 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.33■□□□□ 0.2
Fam228aQ8CDW1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fam228aQ8CDW1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam228aQ8CDW1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam228aQ8CDW1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam228aQ8CDW1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam228aQ8CDW1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fam228aQ8CDW1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms