Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Gm27742-201ENSMUST00000184667 60 ntBASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vcpip1Q8CDG3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Mir3081-201ENSMUST00000175305 84 ntBASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcpip1Q8CDG3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.67■□□□□ 0.26
Vcpip1Q8CDG3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vcpip1Q8CDG3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms