Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco3Q8BQM7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Gm18115-201ENSMUST00000221209 621 ntBASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco3Q8BQM7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms