Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcaf1Q8BNE1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Gm7787-201ENSMUST00000216858 688 ntBASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcaf1Q8BNE1 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.71■□□□□ 0.27
Tcaf1Q8BNE1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
Tcaf1Q8BNE1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tcaf1Q8BNE1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tcaf1Q8BNE1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Gm27300-201ENSMUST00000184085 97 ntBASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Gm27335-201ENSMUST00000184758 97 ntBASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcaf1Q8BNE1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcaf1Q8BNE1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms