Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Gm8096-201ENSMUST00000209921 1591 ntBASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Gm8410-201ENSMUST00000117225 605 ntBASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Gm18049-201ENSMUST00000208909 581 ntBASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Gm14026-201ENSMUST00000120625 1789 ntBASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Col16a1Q8BLX7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Col16a1Q8BLX7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC20.14■□□□□ 0.82
Col16a1Q8BLX7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Col16a1Q8BLX7 Syt7-204ENSMUST00000223586 1344 ntBASIC20.14■□□□□ 0.82
Col16a1Q8BLX7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Gm27533-201ENSMUST00000183800 152 ntBASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Gm13233-201ENSMUST00000118760 1443 ntBASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Gm13244-201ENSMUST00000118855 1446 ntBASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC20.14■□□□□ 0.81
Col16a1Q8BLX7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Gm12490-201ENSMUST00000120255 560 ntBASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Col16a1Q8BLX7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Gm15321-201ENSMUST00000121290 288 ntBASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 AC135669.1-201ENSMUST00000213585 412 ntBASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms