Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nop53Q8BK35 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.67■□□□□ 0.26
Nop53Q8BK35 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.66■□□□□ 0.26
Nop53Q8BK35 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nop53Q8BK35 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nop53Q8BK35 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Nop53Q8BK35 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.64■□□□□ 0.26
Nop53Q8BK35 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nop53Q8BK35 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nop53Q8BK35 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms