Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.31■□□□□ 0.04
Ubp1Q811S7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ubp1Q811S7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.31■□□□□ 0.04
Ubp1Q811S7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubp1Q811S7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.3■□□□□ 0.04
Ubp1Q811S7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Gm11434-201ENSMUST00000122379 629 ntBASIC15.3■□□□□ 0.04
Ubp1Q811S7 Gm11780-201ENSMUST00000136880 516 ntBASIC15.3■□□□□ 0.04
Ubp1Q811S7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubp1Q811S7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Ubp1Q811S7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ubp1Q811S7 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.29■□□□□ 0.04
Ubp1Q811S7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubp1Q811S7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.28■□□□□ 0.04
Ubp1Q811S7 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.28■□□□□ 0.04
Ubp1Q811S7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubp1Q811S7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubp1Q811S7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Gm25990-201ENSMUST00000102440 86 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms