Protein–RNA interactions for Protein: Q80YS6

Afap1, Actin filament-associated protein 1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Afap1Q80YS6 Gm8839-201ENSMUST00000121279 1645 ntBASIC21.9■■□□□ 1.1
Afap1Q80YS6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Afap1Q80YS6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Afap1Q80YS6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Afap1Q80YS6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Afap1Q80YS6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Afap1Q80YS6 Gm13233-201ENSMUST00000118760 1443 ntBASIC21.89■■□□□ 1.1
Afap1Q80YS6 Gm13244-201ENSMUST00000118855 1446 ntBASIC21.89■■□□□ 1.1
Afap1Q80YS6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Afap1Q80YS6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Afap1Q80YS6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Gm13829-201ENSMUST00000119600 138 ntBASIC21.89■■□□□ 1.09
Afap1Q80YS6 Gm14042-201ENSMUST00000120139 833 ntBASIC21.89■■□□□ 1.09
Afap1Q80YS6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC21.89■■□□□ 1.09
Afap1Q80YS6 AC238811.1-201ENSMUST00000225302 441 ntBASIC21.89■■□□□ 1.09
Afap1Q80YS6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Afap1Q80YS6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Afap1Q80YS6 Gm42466-201ENSMUST00000202099 1301 ntBASIC21.88■■□□□ 1.09
Afap1Q80YS6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Afap1Q80YS6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC21.88■■□□□ 1.09
Afap1Q80YS6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Afap1Q80YS6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Afap1Q80YS6 Shd-206ENSMUST00000225145 998 ntBASIC21.88■■□□□ 1.09
Afap1Q80YS6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Afap1Q80YS6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Afap1Q80YS6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Afap1Q80YS6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Afap1Q80YS6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Afap1Q80YS6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Afap1Q80YS6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Afap1Q80YS6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Afap1Q80YS6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC21.87■■□□□ 1.09
Afap1Q80YS6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC21.87■■□□□ 1.09
Afap1Q80YS6 Gm6007-201ENSMUST00000208170 823 ntBASIC21.87■■□□□ 1.09
Afap1Q80YS6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Afap1Q80YS6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Asic1-205ENSMUST00000228185 1818 ntBASIC21.86■■□□□ 1.09
Afap1Q80YS6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Gm18018-201ENSMUST00000198273 408 ntBASIC21.86■■□□□ 1.09
Afap1Q80YS6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Afap1Q80YS6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Afap1Q80YS6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Afap1Q80YS6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Afap1Q80YS6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Afap1Q80YS6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Afap1Q80YS6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Afap1Q80YS6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Afap1Q80YS6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Afap1Q80YS6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms