Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx55Q6ZPL9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx55Q6ZPL9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx55Q6ZPL9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx55Q6ZPL9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx55Q6ZPL9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx55Q6ZPL9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx55Q6ZPL9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Gm18737-201ENSMUST00000173594 937 ntBASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ddx55Q6ZPL9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Gm16026-204ENSMUST00000162652 683 ntBASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx55Q6ZPL9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Gm9824-201ENSMUST00000178707 561 ntBASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx55Q6ZPL9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms