Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm18737-201ENSMUST00000173594 937 ntBASIC14.84□□□□□ -0.03
Rai1Q61818 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.84□□□□□ -0.03
Rai1Q61818 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.84□□□□□ -0.03
Rai1Q61818 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.84□□□□□ -0.03
Rai1Q61818 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.84□□□□□ -0.03
Rai1Q61818 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rai1Q61818 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.84□□□□□ -0.03
Rai1Q61818 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.84□□□□□ -0.03
Rai1Q61818 Gm27430-201ENSMUST00000184585 107 ntBASIC14.84□□□□□ -0.03
Rai1Q61818 Gm44333-201ENSMUST00000197168 107 ntBASIC14.84□□□□□ -0.03
Rai1Q61818 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rai1Q61818 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rai1Q61818 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rai1Q61818 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rai1Q61818 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Rai1Q61818 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.83□□□□□ -0.04
Rai1Q61818 Gm12151-201ENSMUST00000121374 290 ntBASIC14.83□□□□□ -0.04
Rai1Q61818 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rai1Q61818 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.83□□□□□ -0.04
Rai1Q61818 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Rai1Q61818 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rai1Q61818 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rai1Q61818 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rai1Q61818 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rai1Q61818 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.83□□□□□ -0.04
Rai1Q61818 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.83□□□□□ -0.04
Rai1Q61818 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rai1Q61818 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Gm6415-201ENSMUST00000118488 348 ntBASIC14.82□□□□□ -0.04
Rai1Q61818 Gm13015-201ENSMUST00000118674 204 ntBASIC14.82□□□□□ -0.04
Rai1Q61818 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.82□□□□□ -0.04
Rai1Q61818 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
Rai1Q61818 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.82□□□□□ -0.04
Rai1Q61818 Mir7684-201ENSMUST00000183858 60 ntBASIC14.82□□□□□ -0.04
Rai1Q61818 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.82□□□□□ -0.04
Rai1Q61818 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rai1Q61818 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.82□□□□□ -0.04
Rai1Q61818 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.82□□□□□ -0.04
Rai1Q61818 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.82□□□□□ -0.04
Rai1Q61818 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Gm27437-201ENSMUST00000183429 107 ntBASIC14.82□□□□□ -0.04
Rai1Q61818 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rai1Q61818 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rai1Q61818 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rai1Q61818 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.81□□□□□ -0.04
Rai1Q61818 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.81□□□□□ -0.04
Rai1Q61818 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.81□□□□□ -0.04
Rai1Q61818 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.81□□□□□ -0.04
Rai1Q61818 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rai1Q61818 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rai1Q61818 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rai1Q61818 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms