Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1eQ61290 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1eQ61290 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1eQ61290 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1eQ61290 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1eQ61290 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1eQ61290 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1eQ61290 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.16■□□□□ 0.02
Cacna1eQ61290 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.16■□□□□ 0.02
Cacna1eQ61290 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1eQ61290 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1eQ61290 Gm10499-201ENSMUST00000174094 934 ntBASIC15.15■□□□□ 0.02
Cacna1eQ61290 Gm22175-201ENSMUST00000175007 78 ntBASIC15.15■□□□□ 0.02
Cacna1eQ61290 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1eQ61290 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1eQ61290 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1eQ61290 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.13■□□□□ 0.01
Cacna1eQ61290 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Gm27306-201ENSMUST00000183970 107 ntBASIC15.13■□□□□ 0.01
Cacna1eQ61290 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Cacna1eQ61290 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Gm13015-201ENSMUST00000118674 204 ntBASIC15.13■□□□□ 0.01
Cacna1eQ61290 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.13■□□□□ 0.01
Cacna1eQ61290 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.13■□□□□ 0.01
Cacna1eQ61290 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1eQ61290 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cacna1eQ61290 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms