Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.8■□□□□ 0.44
Scnn1aQ61180 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scnn1aQ61180 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.8■□□□□ 0.44
Scnn1aQ61180 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scnn1aQ61180 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.79■□□□□ 0.44
Scnn1aQ61180 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scnn1aQ61180 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.78■□□□□ 0.44
Scnn1aQ61180 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.78■□□□□ 0.44
Scnn1aQ61180 Gm16198-201ENSMUST00000118766 670 ntBASIC17.78■□□□□ 0.44
Scnn1aQ61180 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scnn1aQ61180 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Gm2272-201ENSMUST00000194903 582 ntBASIC17.77■□□□□ 0.44
Scnn1aQ61180 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scnn1aQ61180 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scnn1aQ61180 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Scnn1aQ61180 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scnn1aQ61180 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Scnn1aQ61180 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scnn1aQ61180 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Gm11025-201ENSMUST00000140773 466 ntBASIC17.76■□□□□ 0.43
Scnn1aQ61180 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.76■□□□□ 0.43
Scnn1aQ61180 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.76■□□□□ 0.43
Scnn1aQ61180 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Scnn1aQ61180 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.76■□□□□ 0.43
Scnn1aQ61180 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.76■□□□□ 0.43
Scnn1aQ61180 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.76■□□□□ 0.43
Scnn1aQ61180 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Scnn1aQ61180 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms