Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gm18284-201ENSMUST00000172604 624 ntBASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7d-4Q5R1H9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Gm12085-201ENSMUST00000119263 940 ntBASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7d-4Q5R1H9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Gm44450-201ENSMUST00000199528 114 ntBASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Gm18421-201ENSMUST00000204122 625 ntBASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav7d-4Q5R1H9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms