Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcdP82347 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcdP82347 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcdP82347 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcdP82347 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcdP82347 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcdP82347 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcdP82347 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcdP82347 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcdP82347 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.43□□□□□ -0.1
SgcdP82347 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SgcdP82347 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SgcdP82347 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SgcdP82347 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SgcdP82347 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.43□□□□□ -0.1
SgcdP82347 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.43□□□□□ -0.1
SgcdP82347 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SgcdP82347 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SgcdP82347 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.43□□□□□ -0.1
SgcdP82347 Rubie-203ENSMUST00000227803 2430 ntBASIC14.43□□□□□ -0.1
SgcdP82347 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcdP82347 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SgcdP82347 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SgcdP82347 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SgcdP82347 Actl10-202ENSMUST00000226583 1501 ntBASIC14.42□□□□□ -0.1
SgcdP82347 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SgcdP82347 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SgcdP82347 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
SgcdP82347 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SgcdP82347 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SgcdP82347 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.42□□□□□ -0.1
SgcdP82347 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SgcdP82347 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SgcdP82347 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SgcdP82347 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SgcdP82347 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SgcdP82347 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.41□□□□□ -0.1
SgcdP82347 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SgcdP82347 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SgcdP82347 Gm7461-201ENSMUST00000058918 827 ntBASIC14.41□□□□□ -0.1
SgcdP82347 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SgcdP82347 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SgcdP82347 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcdP82347 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SgcdP82347 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SgcdP82347 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.4□□□□□ -0.1
SgcdP82347 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcdP82347 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcdP82347 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcdP82347 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SgcdP82347 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcdP82347 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcdP82347 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SgcdP82347 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms