Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Sf3b6P59708 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.8□□□□□ -0.2
Sf3b6P59708 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sf3b6P59708 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Gm10013-201ENSMUST00000106074 672 ntBASIC13.8□□□□□ -0.2
Sf3b6P59708 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Sf3b6P59708 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sf3b6P59708 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.8□□□□□ -0.2
Sf3b6P59708 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Sf3b6P59708 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.8□□□□□ -0.2
Sf3b6P59708 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sf3b6P59708 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Sf3b6P59708 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.79□□□□□ -0.2
Sf3b6P59708 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Gm22697-201ENSMUST00000175194 63 ntBASIC13.79□□□□□ -0.2
Sf3b6P59708 Gm7977-201ENSMUST00000193787 748 ntBASIC13.79□□□□□ -0.2
Sf3b6P59708 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sf3b6P59708 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sf3b6P59708 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.79□□□□□ -0.2
Sf3b6P59708 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.79□□□□□ -0.2
Sf3b6P59708 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.79□□□□□ -0.2
Sf3b6P59708 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3b6P59708 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.78□□□□□ -0.2
Sf3b6P59708 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sf3b6P59708 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.78□□□□□ -0.2
Sf3b6P59708 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Gm27389-201ENSMUST00000183622 195 ntBASIC13.78□□□□□ -0.2
Sf3b6P59708 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.78□□□□□ -0.2
Sf3b6P59708 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.78□□□□□ -0.2
Sf3b6P59708 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sf3b6P59708 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sf3b6P59708 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.78□□□□□ -0.2
Sf3b6P59708 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sf3b6P59708 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.78□□□□□ -0.2
Sf3b6P59708 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms