Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox3P53784 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.88□□□□□ -0.03
Sox3P53784 Mir3113-201ENSMUST00000175478 76 ntBASIC14.88□□□□□ -0.03
Sox3P53784 Gm44430-201ENSMUST00000203376 995 ntBASIC14.88□□□□□ -0.03
Sox3P53784 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox3P53784 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.88□□□□□ -0.03
Sox3P53784 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox3P53784 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sox3P53784 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox3P53784 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sox3P53784 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sox3P53784 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Sox3P53784 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.87□□□□□ -0.03
Sox3P53784 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.87□□□□□ -0.03
Sox3P53784 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Mir8117-201ENSMUST00000184773 107 ntBASIC14.87□□□□□ -0.03
Sox3P53784 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.87□□□□□ -0.03
Sox3P53784 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox3P53784 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sox3P53784 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.86□□□□□ -0.03
Sox3P53784 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Sox3P53784 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.86□□□□□ -0.03
Sox3P53784 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.86□□□□□ -0.03
Sox3P53784 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.86□□□□□ -0.03
Sox3P53784 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Sox3P53784 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox3P53784 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.85□□□□□ -0.03
Sox3P53784 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.85□□□□□ -0.03
Sox3P53784 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.85□□□□□ -0.03
Sox3P53784 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sox3P53784 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Gm14701-201ENSMUST00000117156 348 ntBASIC14.85□□□□□ -0.03
Sox3P53784 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Gm11025-201ENSMUST00000140773 466 ntBASIC14.85□□□□□ -0.03
Sox3P53784 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox3P53784 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.85□□□□□ -0.03
Sox3P53784 Gm7506-201ENSMUST00000207758 815 ntBASIC14.85□□□□□ -0.03
Sox3P53784 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms