Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Upk2P38575 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Gm28033-201ENSMUST00000184224 96 ntBASIC13.62□□□□□ -0.23
Upk2P38575 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.62□□□□□ -0.23
Upk2P38575 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.62□□□□□ -0.23
Upk2P38575 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Upk2P38575 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Upk2P38575 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Upk2P38575 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk2P38575 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.61□□□□□ -0.23
Upk2P38575 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Upk2P38575 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Upk2P38575 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Upk2P38575 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.61□□□□□ -0.23
Upk2P38575 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.61□□□□□ -0.23
Upk2P38575 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Upk2P38575 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.61□□□□□ -0.23
Upk2P38575 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.61□□□□□ -0.23
Upk2P38575 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.61□□□□□ -0.23
Upk2P38575 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Upk2P38575 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.61□□□□□ -0.23
Upk2P38575 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.61□□□□□ -0.23
Upk2P38575 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Upk2P38575 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.61□□□□□ -0.23
Upk2P38575 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Upk2P38575 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upk2P38575 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Upk2P38575 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.6□□□□□ -0.23
Upk2P38575 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Upk2P38575 Gm15358-201ENSMUST00000119249 520 ntBASIC13.6□□□□□ -0.23
Upk2P38575 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Upk2P38575 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Upk2P38575 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.6□□□□□ -0.23
Upk2P38575 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.6□□□□□ -0.23
Upk2P38575 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Upk2P38575 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 BC037039-201ENSMUST00000192003 2205 ntBASIC13.6□□□□□ -0.23
Upk2P38575 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk2P38575 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms