Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox5P35710 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sox5P35710 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sox5P35710 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Gm13312-201ENSMUST00000119631 718 ntBASIC16.96■□□□□ 0.31
Sox5P35710 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.96■□□□□ 0.31
Sox5P35710 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.96■□□□□ 0.31
Sox5P35710 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sox5P35710 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sox5P35710 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox5P35710 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sox5P35710 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Sox5P35710 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Sox5P35710 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox5P35710 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox5P35710 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Sox5P35710 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox5P35710 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sox5P35710 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.96■□□□□ 0.3
Sox5P35710 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sox5P35710 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sox5P35710 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.95■□□□□ 0.3
Sox5P35710 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sox5P35710 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sox5P35710 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.95■□□□□ 0.3
Sox5P35710 Gm45328-201ENSMUST00000210942 917 ntBASIC16.95■□□□□ 0.3
Sox5P35710 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.95■□□□□ 0.3
Sox5P35710 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.95■□□□□ 0.3
Sox5P35710 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.95■□□□□ 0.3
Sox5P35710 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.95■□□□□ 0.3
Sox5P35710 Efs-202ENSMUST00000227037 2540 ntBASIC16.95■□□□□ 0.3
Sox5P35710 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox5P35710 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.94■□□□□ 0.3
Sox5P35710 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Sox5P35710 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.94■□□□□ 0.3
Sox5P35710 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.94■□□□□ 0.3
Sox5P35710 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.94■□□□□ 0.3
Sox5P35710 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sox5P35710 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox5P35710 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.94■□□□□ 0.3
Sox5P35710 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.93■□□□□ 0.3
Sox5P35710 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox5P35710 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.93■□□□□ 0.3
Sox5P35710 Gm10231-201ENSMUST00000181584 441 ntBASIC16.93■□□□□ 0.3
Sox5P35710 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms