Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.77■□□□□ 0.44
Vcam1P29533 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.77■□□□□ 0.44
Vcam1P29533 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Vcam1P29533 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcam1P29533 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Vcam1P29533 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
Vcam1P29533 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vcam1P29533 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vcam1P29533 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vcam1P29533 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Vcam1P29533 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vcam1P29533 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Vcam1P29533 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vcam1P29533 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Vcam1P29533 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vcam1P29533 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.76■□□□□ 0.43
Vcam1P29533 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vcam1P29533 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vcam1P29533 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.76■□□□□ 0.43
Vcam1P29533 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.76■□□□□ 0.43
Vcam1P29533 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.76■□□□□ 0.43
Vcam1P29533 Mir6956-201ENSMUST00000183598 62 ntBASIC17.76■□□□□ 0.43
Vcam1P29533 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.76■□□□□ 0.43
Vcam1P29533 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.76■□□□□ 0.43
Vcam1P29533 Gm43125-201ENSMUST00000201724 730 ntBASIC17.76■□□□□ 0.43
Vcam1P29533 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Vcam1P29533 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.76■□□□□ 0.43
Vcam1P29533 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vcam1P29533 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vcam1P29533 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Vcam1P29533 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.75■□□□□ 0.43
Vcam1P29533 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vcam1P29533 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vcam1P29533 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Vcam1P29533 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.75■□□□□ 0.43
Vcam1P29533 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.75■□□□□ 0.43
Vcam1P29533 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.75■□□□□ 0.43
Vcam1P29533 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.75■□□□□ 0.43
Vcam1P29533 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vcam1P29533 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.74■□□□□ 0.43
Vcam1P29533 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.74■□□□□ 0.43
Vcam1P29533 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Gm44872-201ENSMUST00000207864 420 ntBASIC17.74■□□□□ 0.43
Vcam1P29533 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.74■□□□□ 0.43
Vcam1P29533 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vcam1P29533 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Vcam1P29533 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcam1P29533 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.73■□□□□ 0.43
Vcam1P29533 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms