Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.19□□□□□ -0.14
Cbx3P23198 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cbx3P23198 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.19□□□□□ -0.14
Cbx3P23198 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cbx3P23198 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cbx3P23198 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cbx3P23198 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cbx3P23198 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cbx3P23198 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.19□□□□□ -0.14
Cbx3P23198 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cbx3P23198 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cbx3P23198 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.18□□□□□ -0.14
Cbx3P23198 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Cbx3P23198 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cbx3P23198 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Cbx3P23198 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.18□□□□□ -0.14
Cbx3P23198 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.18□□□□□ -0.14
Cbx3P23198 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cbx3P23198 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cbx3P23198 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cbx3P23198 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.18□□□□□ -0.14
Cbx3P23198 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.18□□□□□ -0.14
Cbx3P23198 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.17□□□□□ -0.14
Cbx3P23198 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cbx3P23198 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.17□□□□□ -0.14
Cbx3P23198 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.17□□□□□ -0.14
Cbx3P23198 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.17□□□□□ -0.14
Cbx3P23198 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cbx3P23198 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cbx3P23198 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Gm6576-201ENSMUST00000169678 883 ntBASIC14.17□□□□□ -0.14
Cbx3P23198 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cbx3P23198 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.17□□□□□ -0.14
Cbx3P23198 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cbx3P23198 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.16□□□□□ -0.14
Cbx3P23198 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cbx3P23198 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.16□□□□□ -0.14
Cbx3P23198 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cbx3P23198 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.16□□□□□ -0.14
Cbx3P23198 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.16□□□□□ -0.14
Cbx3P23198 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.16□□□□□ -0.14
Cbx3P23198 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.16□□□□□ -0.14
Cbx3P23198 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms