Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ctla2aP12399 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctla2aP12399 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctla2aP12399 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctla2aP12399 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ctla2aP12399 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctla2aP12399 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctla2aP12399 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ctla2aP12399 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.02□□□□□ -0.16
Ctla2aP12399 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctla2aP12399 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctla2aP12399 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ctla2aP12399 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctla2aP12399 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctla2aP12399 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ctla2aP12399 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.02□□□□□ -0.17
Ctla2aP12399 Gm38027-201ENSMUST00000192315 235 ntBASIC14.02□□□□□ -0.17
Ctla2aP12399 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
Ctla2aP12399 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctla2aP12399 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.01□□□□□ -0.17
Ctla2aP12399 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ctla2aP12399 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ctla2aP12399 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.01□□□□□ -0.17
Ctla2aP12399 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Gm12441-201ENSMUST00000121806 588 ntBASIC14.01□□□□□ -0.17
Ctla2aP12399 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Gm18421-201ENSMUST00000204122 625 ntBASIC14.01□□□□□ -0.17
Ctla2aP12399 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ctla2aP12399 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.01□□□□□ -0.17
Ctla2aP12399 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctla2aP12399 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Gm8784-201ENSMUST00000222096 1435 ntBASIC14□□□□□ -0.17
Ctla2aP12399 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Ctla2aP12399 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ctla2aP12399 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ctla2aP12399 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Ctla2aP12399 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ctla2aP12399 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14□□□□□ -0.17
Ctla2aP12399 Gm7791-201ENSMUST00000219066 539 ntBASIC14□□□□□ -0.17
Ctla2aP12399 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ctla2aP12399 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ctla2aP12399 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctla2aP12399 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms