Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccl3P10855 Gm25349-201ENSMUST00000177728 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm23616-201ENSMUST00000177797 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm25871-201ENSMUST00000177816 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm24752-201ENSMUST00000178240 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm24496-201ENSMUST00000178287 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm25649-201ENSMUST00000178476 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm25548-201ENSMUST00000178681 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm23147-201ENSMUST00000178841 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm26095-201ENSMUST00000179270 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm22171-201ENSMUST00000179283 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm23936-201ENSMUST00000179354 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm22619-201ENSMUST00000179516 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm25255-201ENSMUST00000179579 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm24755-201ENSMUST00000179691 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm26506-201ENSMUST00000179692 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm25086-201ENSMUST00000179931 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm23243-201ENSMUST00000180047 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm24659-201ENSMUST00000180212 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm24169-201ENSMUST00000180244 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm23689-201ENSMUST00000180354 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Gm27359-201ENSMUST00000184153 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm27785-201ENSMUST00000184268 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm27466-201ENSMUST00000184396 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm27703-201ENSMUST00000184836 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccl3P10855 Gm10253-201ENSMUST00000194270 940 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccl3P10855 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccl3P10855 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccl3P10855 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccl3P10855 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccl3P10855 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccl3P10855 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccl3P10855 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccl3P10855 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccl3P10855 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ccl3P10855 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccl3P10855 Gm24158-201ENSMUST00000175263 71 ntBASIC13.66□□□□□ -0.22
Ccl3P10855 Gm27430-201ENSMUST00000184585 107 ntBASIC13.66□□□□□ -0.22
Ccl3P10855 Gm44333-201ENSMUST00000197168 107 ntBASIC13.66□□□□□ -0.22
Ccl3P10855 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccl3P10855 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.66□□□□□ -0.22
Ccl3P10855 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl3P10855 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccl3P10855 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccl3P10855 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccl3P10855 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.65□□□□□ -0.22
Ccl3P10855 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.65□□□□□ -0.22
Ccl3P10855 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccl3P10855 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.65□□□□□ -0.22
Ccl3P10855 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl3P10855 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms